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2023
Su C, Hou Y, Zhou M, Rajendran S, Maasch JRMA, Abedi Z, Zhang H, Bai Z, Cuturrufo A, Guo W et al..  2023.  Biomedical discovery through the integrative biomedical knowledge hub (iBKH).. iScience. 26(4):106460.
Wang D, Fan F, Wu Z, Liu R, Wang F, Yu H.  2023.  CTformer: convolution-free Token2Token dilated vision transformer for low-dose CT denoising.. Phys Med Biol. 68(6)
Zang C, Zhang Y, Xu J, Bian J, Morozyuk D, Schenck EJ, Khullar D, Nordvig AS, Shenkman EA, Rothman RL et al..  2023.  Data-driven analysis to understand long COVID using electronic health records from the RECOVER initiative.. Nat Commun. 14(1):1948.
Zhang H, Zang C, Xu Z, Zhang Y, Xu J, Bian J, Morozyuk D, Khullar D, Zhang Y, Nordvig AS et al..  2023.  Data-driven identification of post-acute SARS-CoV-2 infection subphenotypes.. Nat Med. 29(1):226-235.
Varma JK, Zang C, Carton TW, Block JP, Khullar DJ, Zhang Y, Weiner MG, Rothman RL, Schenck EJ, Xu Z et al..  2023.  Excess burden of respiratory and abdominal conditions following COVID-19 infections during the ancestral and Delta variant periods in the United States: An EHR-based cohort study from the RECOVER Program.. medRxiv.
Adekkanattu P, Rasmussen LV, Pacheco JA, Kabariti J, Stone DJ, Yu Y, Jiang G, Luo Y, Brandt PS, Xu Z et al..  2023.  Prediction of left ventricular ejection fraction changes in heart failure patients using machine learning and electronic health records: a multi-site study.. Sci Rep. 13(1):294.
Zang C, Hou Y, Schenck E, Xu Z, Zhang Y, Xu J, Bian J, Morozyuk D, Khullar D, Nordvig A et al..  2023.  Risk Factors and Predictive Modeling for Post-Acute Sequelae of SARS-CoV-2 Infection: Findings from EHR Cohorts of the RECOVER Initiative.. Res Sq.
Zhou M, Zhang H, Bai Z, Mann-Krzisnik D, Wang F, Li Y.  2023.  Single-cell multi-omic topic embedding reveals cell-type-specific and COVID-19 severity-related immune signatures.. bioRxiv.
2022
Mehta B, Ho K, Ling V, Goodman S, Parks M, Ravi B, Banerjee S, Wang F, Ibrahim S, Cram P.  2022.  Are Income-based Differences in TKA Use and Outcomes Reduced in a Single-payer System? A Large-database Comparison of the United States and Canada. Clin Orthop Relat Res. 480(9):1636-1645.
Lin M, Hou B, Liu L, Gordon M, Kass M, Wang F, Van Tassel SH, Peng Y.  2022.  Automated diagnosing primary open-angle glaucoma from fundus image by simulating human's grading with deep learning.. Sci Rep. 12(1):14080.
Lin M, Hou B, Liu L, Gordon M, Kass M, Wang F, Van Tassel SH, Peng Y.  2022.  Automated diagnosing primary open-angle glaucoma from fundus image by simulating human's grading with deep learning.. Sci Rep. 12(1):14080.
Adler DA, Wang F, Mohr DC, Estrin D, Livesey C, Choudhury T.  2022.  A call for open data to develop mental health digital biomarkers.. BJPsych Open. 8(2):e58.
Yuan Z, Zhao Z, Sun H, Li J, Wang F, Yu S.  2022.  CODER: Knowledge-infused cross-lingual medical term embedding for term normalization.. J Biomed Inform. 126:103983.
Zeng X, Wang F, Luo Y, Kang S-G, Tang J, Lightstone FC, Fang EF, Cornell W, Nussinov R, Cheng F.  2022.  Deep generative molecular design reshapes drug discovery.. Cell Rep Med. 3(12):100794.
Zeng X, Wang F, Luo Y, Kang S-G, Tang J, Lightstone FC, Fang EF, Cornell W, Nussinov R, Cheng F.  2022.  Deep generative molecular design reshapes drug discovery.. Cell Rep Med. 3(12):100794.
Brandt PS, Pacheco JA, Adekkanattu P, Sholle ET, Abedian S, Stone DJ, Knaack DM, Xu J, Xu Z, Peng Y et al..  2022.  Design and validation of a FHIR-based EHR-driven phenotyping toolbox.. J Am Med Inform Assoc. 29(9):1449-1460.
Liu J, Westblade LF, Wang F, Chadburn A, Fideli R, Craney A, Rand S, Cushing MM, Meng J, Zhao Z et al..  2022.  Distinct Laboratory Test Result Profiles Between SARS-CoV-2 and Seasonable Influenza Infected Patients.. Ann Clin Lab Sci. 52(6):871-879.
Honarvar H, Agarwal C, Somani S, Vaid A, Lampert J, Wanyan T, Reddy VY, Nadkarni GN, Miotto R, Zitnik M et al..  2022.  Enhancing convolutional neural network predictions of electrocardiograms with left ventricular dysfunction using a novel sub-waveform representation.. Cardiovasc Digit Health J. 3(5):220-231.
Xu W, Su C, Li Y, Rogers S, Wang F, Chen K, Aseltine R.  2022.  Improving suicide risk prediction via targeted data fusion: proof of concept using medical claims data.. J Am Med Inform Assoc. 29(3):500-511.
Xu J, Mao C, Hou Y, Luo Y, Binder JL, Zhou Y, Bekris LM, Shin J, Hu M, Wang F et al..  2022.  Interpretable deep learning translation of GWAS and multi-omics findings to identify pathobiology and drug repurposing in Alzheimer's disease.. Cell Rep. 41(9):111717.
Xu J, Mao C, Hou Y, Luo Y, Binder JL, Zhou Y, Bekris LM, Shin J, Hu M, Wang F et al..  2022.  Interpretable deep learning translation of GWAS and multi-omics findings to identify pathobiology and drug repurposing in Alzheimer's disease.. Cell Rep. 41(9):111717.
Li Y, Brendel M, Wu N, Ge W, Zhang H, Rietschel P, Quek RGW, Pouliot J-F, Wang F, Harnett J.  2022.  Machine learning models for identifying predictors of clinical outcomes with first-line immune checkpoint inhibitor therapy in advanced non-small cell lung cancer.. Sci Rep. 12(1):17670.
Tummalapalli SLekha, Cukor D, Bohmart A, Levine DM, Parker TS, Liu F, Perlman A, Srivatana V, Turchioe MReading, Ibrahim SA et al..  2022.  A Mobile Health-Based Survey to Assess COVID-19 Vaccine Intent and Uptake Among Patients on Dialysis.. Kidney Int Rep. 7(3):633-637.
Tummalapalli SLekha, Cukor D, Bohmart A, Levine DM, Parker TS, Liu F, Perlman A, Srivatana V, Turchioe MReading, Ibrahim SA et al..  2022.  A Mobile Health-Based Survey to Assess COVID-19 Vaccine Intent and Uptake Among Patients on Dialysis.. Kidney Int Rep. 7(3):633-637.
Kline A, Wang H, Li Y, Dennis S, Hutch M, Xu Z, Wang F, Cheng F, Luo Y.  2022.  Multimodal machine learning in precision health: A scoping review.. NPJ Digit Med. 5(1):171.