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2023
Xu J, Zhang H, Zhang H, Bian J, Wang F.  2023.  Machine learning enabled subgroup analysis with real-world data to inform clinical trial eligibility criteria design.. Sci Rep. 13(1):613.
Mehta B, Goodman S, DiCarlo E, Jannat-Khah D, J Gibbons AB, Otero M, Donlin L, Pannellini T, Robinson WH, Sculco P et al..  2023.  Machine learning identification of thresholds to discriminate osteoarthritis and rheumatoid arthritis synovial inflammation.. Arthritis Res Ther. 25(1):31.
Adekkanattu P, Rasmussen LV, Pacheco JA, Kabariti J, Stone DJ, Yu Y, Jiang G, Luo Y, Brandt PS, Xu Z et al..  2023.  Prediction of left ventricular ejection fraction changes in heart failure patients using machine learning and electronic health records: a multi-site study.. Sci Rep. 13(1):294.
Khullar D, Zhang Y, Zang C, Xu Z, Wang F, Weiner MG, Carton TW, Rothman RL, Block JP, Kaushal R.  2023.  Racial/Ethnic Disparities in Post-acute Sequelae of SARS-CoV-2 Infection in New York: an EHR-Based Cohort Study from the RECOVER Program.. J Gen Intern Med. :1-10.
Khullar D, Zhang Y, Zang C, Xu Z, Wang F, Weiner MG, Carton TW, Rothman RL, Block JP, Kaushal R.  2023.  Racial/Ethnic Disparities in Post-acute Sequelae of SARS-CoV-2 Infection in New York: an EHR-Based Cohort Study from the RECOVER Program.. J Gen Intern Med. :1-10.
Zang C, Hou Y, Schenck E, Xu Z, Zhang Y, Xu J, Bian J, Morozyuk D, Khullar D, Nordvig A et al..  2023.  Risk Factors and Predictive Modeling for Post-Acute Sequelae of SARS-CoV-2 Infection: Findings from EHR Cohorts of the RECOVER Initiative.. Res Sq.
Zang C, Hou Y, Schenck E, Xu Z, Zhang Y, Xu J, Bian J, Morozyuk D, Khullar D, Nordvig A et al..  2023.  Risk Factors and Predictive Modeling for Post-Acute Sequelae of SARS-CoV-2 Infection: Findings from EHR Cohorts of the RECOVER Initiative.. Res Sq.
Zhou M, Zhang H, Bai Z, Mann-Krzisnik D, Wang F, Li Y.  2023.  Single-cell multi-omic topic embedding reveals cell-type-specific and COVID-19 severity-related immune signatures.. bioRxiv.
2024
Pan W, Xu Z, Rajendran S, Wang F.  2024.  An adaptive federated learning framework for clinical risk prediction with electronic health records from multiple hospitals.. Patterns (N Y). 5(1):100898.
Bruno AM, Zang C, Xu Z, Wang F, Weiner MG, Guthe N, Fitzgerald M, Kaushal R, Carton TW, Metz TD.  2024.  Association between acquiring SARS-CoV-2 during pregnancy and post-acute sequelae of SARS-CoV-2 infection: RECOVER electronic health record cohort analysis.. EClinicalMedicine. 73:102654.
Bruno AM, Zang C, Xu Z, Wang F, Weiner MG, Guthe N, Fitzgerald M, Kaushal R, Carton TW, Metz TD.  2024.  Association between acquiring SARS-CoV-2 during pregnancy and post-acute sequelae of SARS-CoV-2 infection: RECOVER electronic health record cohort analysis.. EClinicalMedicine. 73:102654.
He X-Y, Gao Y, Ng D, Michalopoulou E, George S, Adrover JM, Sun L, Albrengues J, Daßler-Plenker J, Han X et al..  2024.  Chronic stress increases metastasis via neutrophil-mediated changes to the microenvironment.. Cancer Cell. 42(3):474-486.e12.
He X-Y, Gao Y, Ng D, Michalopoulou E, George S, Adrover JM, Sun L, Albrengues J, Daßler-Plenker J, Han X et al..  2024.  Chronic stress increases metastasis via neutrophil-mediated changes to the microenvironment.. Cancer Cell. 42(3):474-486.e12.
He X, Wei R, Huang Y, Chen Z, Lyu T, Bost S, Tong J, Li L, Zhou Y, Li Z et al..  2024.  Develop and validate a computable phenotype for the identification of Alzheimer's disease patients using electronic health record data.. Alzheimers Dement (Amst). 16(3):e12613.
He X, Wei R, Huang Y, Chen Z, Lyu T, Bost S, Tong J, Li L, Zhou Y, Li Z et al..  2024.  Develop and validate a computable phenotype for the identification of Alzheimer's disease patients using electronic health record data.. Alzheimers Dement (Amst). 16(3):e12613.
He X, Wei R, Huang Y, Chen Z, Lyu T, Bost S, Tong J, Li L, Zhou Y, Li Z et al..  2024.  Develop and validate a computable phenotype for the identification of Alzheimer's disease patients using electronic health record data.. Alzheimers Dement (Amst). 16(3):e12613.
Su C, Hou Y, Xu J, Xu Z, Zhou M, Ke A, Li H, Xu J, Brendel M, Maasch JRMA et al..  2024.  Identification of Parkinson's disease PACE subtypes and repurposing treatments through integrative analyses of multimodal data.. NPJ Digit Med. 7(1):184.
Zang C, Hou Y, Schenck EJ, Xu Z, Zhang Y, Xu J, Bian J, Morozyuk D, Khullar D, Nordvig AS et al..  2024.  Identification of risk factors of Long COVID and predictive modeling in the RECOVER EHR cohorts.. Commun Med (Lond). 4(1):130.
Zang C, Hou Y, Schenck EJ, Xu Z, Zhang Y, Xu J, Bian J, Morozyuk D, Khullar D, Nordvig AS et al..  2024.  Identification of risk factors of Long COVID and predictive modeling in the RECOVER EHR cohorts.. Commun Med (Lond). 4(1):130.
Wang F, Beecy A.  2024.  Implementing AI models in clinical workflows: a roadmap.. BMJ Evid Based Med.
Lyu D, Wang X, Chen Y, Wang F.  2024.  Language model and its interpretability in biomedicine: A scoping review.. iScience. 27(4):109334.
Lyu D, Wang X, Chen Y, Wang F.  2024.  Language model and its interpretability in biomedicine: A scoping review.. iScience. 27(4):109334.
Rajendran S, Pan W, Sabuncu MR, Chen Y, Zhou J, Wang F.  2024.  Learning across diverse biomedical data modalities and cohorts: Challenges and opportunities for innovation.. Patterns (N Y). 5(2):100913.
Zhou M, Zhang H, Bai Z, Mann-Krzisnik D, Wang F, Li Y.  2024.  Protocol to perform integrative analysis of high-dimensional single-cell multimodal data using an interpretable deep learning technique.. STAR Protoc. 5(2):103066.
Bai Z, Bartelo N, Aslam M, Murphy EA, Hale CR, Blachere NE, Parveen S, Spolaore E, DiCarlo E, Gravallese EM et al..  2024.  Synovial fibroblast gene expression is associated with sensory nerve growth and pain in rheumatoid arthritis.. Sci Transl Med. 16(742):eadk3506.